RASPODOM ONLINE FORM

Rapid Motif-Based Prediction of Circular Permutations in Multi-Domain Proteins




Explanations:

Input two sequences. The format used is custom: each sequence starts with a ">" character followed by a unique sequence name. Each of the following lines is a number corresponding to one domain (you can simply strip the "PD" from the prodom domain ID's). Next sequences follow -- just like a in a regular fasta file. Here is an example; click on the "submit" button to see how it renders.